Tools Overview Sequence Design shRNA Target Design Primer Design Sequence Analysis Sequence Alignment Sequence Dot Plot GC Content Calculator DNA Secondary Structure DNA Reverse Complement Coding Sequence Analysis Codon Table Codon Optimization DNA Translation How to Use Vector Design Studio About VectorBuilder
Tools Sequence Design shRNA Target Design Design optimal shRNA sequences by knockdown score and position for your target sequence. Primer Design Design primer sequences optimized for melting temperature, GC content, and target specificity for your desired region. Sequence Analysis Sequence Alignment Pair-wise comparison of DNA, protein, or translation-based DNA sequences. Sequence Dot Plot Two-dimensional plot for identifying regions with similar features between two DNA or RNA sequences. GC Content Calculator Calculate GC content of entire sequence and specific regions. DNA Secondary Structure Predict secondary structures from base pair interactions. DNA Reverse Complement Retrieve reverse, complement, or reverse complement sequences. Coding Sequence Analysis Codon Table Obtain codon table with species-specific codon frequencies. Codon Optimization Optimize codons according to species, cleavage sites, and clonability. DNA Translation Retrieve amino acid sequence from DNA input.
